Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative chaperonin | SAMEA3472056_04136 | Not Available | Negative | 4207866 - 4209806 | 71123.1 |
| protein | SAMEA3472056_04137 | Not Available | Negative | 4209803 - 4210483 | 24447.4 |
| von willebrand factor type a domain-containing protein | SAMEA3472056_04138 | Not Available | Negative | 4210561 - 4211220 | 24177.9 |
| multidrug efflux system subunit mdta | SAMEA3472056_04142 | Not Available | Positive | 4212316 - 4213683 | 49304.7 |
| multidrug resistance protein | SAMEA3472056_04143 | Not Available | Positive | 4213683 - 4216805 | 112084.0 |
| multidrug resistance protein | SAMEA3472056_04144 | Not Available | Positive | 4216806 - 4219883 | 111033.0 |
| putative multidrug resistance protein | SAMEA3472056_04145 | Not Available | Positive | 4219884 - 4221299 | 50926.3 |
| two-component sensor kinase | SAMEA3472056_04146 | Not Available | Positive | 4221296 - 4222699 | 52047.4 |
| two-component response regulator | SAMEA3472056_04147 | Not Available | Positive | 4222696 - 4223418 | 27657.5 |
| protein | SAMEA3472056_04148 | Not Available | Positive | 4223609 - 4223941 | 11994.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





