Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Gpt | SAMEA3472056_04156 | Not Available | Negative | 4228428 - 4230875 | 86498.7 |
| Tail protein | SAMEA3472056_04157 | Not Available | Negative | 4231020 - 4231295 | 9637.89 |
| Tail tube protein | SAMEA3472056_04158 | Not Available | Negative | 4231352 - 4231870 | 19069.8 |
| Phage tail sheath protein fi | SAMEA3472056_04159 | Not Available | Negative | 4231883 - 4232932 | 38138.1 |
| Hypothetical protein | SAMEA3472056_04497 | Not Available | Positive | 4596991 - 4597506 | 16813.2 |
| Outer membrane protein lom precursor | SAMEA3472056_04498 | Not Available | Negative | 4598068 - 4598667 | 21784.2 |
| Putative tail tip assembly protein | SAMEA3472056_04499 | Not Available | Negative | 4598735 - 4602214 | 127373.0 |
| Tail component | SAMEA3472056_04500 | Not Available | Negative | 4602275 - 4602847 | 19305.3 |
| Tail fiber component | SAMEA3472056_04501 | Not Available | Negative | 4602844 - 4603443 | 22809.9 |
| Tail component | SAMEA3472056_04502 | Not Available | Negative | 4603592 - 4604290 | 25694.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





