Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| wbdn | SAMEA3472056_04104 | Not Available | Negative | 4169736 - 4170476 | 28806.6 |
| utp--glucose-1-phosphate uridylyltransferase subunit galf | SAMEA3472056_04106 | Not Available | Negative | 4170616 - 4171503 | 32713.2 |
| udp-n-acetylglucosamine 4-epimerase (udp-glcnac 4-epimerase) | SAMEA3472056_04107 | Not Available | Negative | 4171746 - 4172741 | 37160.3 |
| colanic acid biosynthesis protein | SAMEA3472056_04108 | Not Available | Negative | 4172899 - 4174293 | 51340.9 |
| putative colanic acid biosynthesis glycosyltransferase | SAMEA3472056_04109 | Not Available | Negative | 4174304 - 4175524 | 45360.2 |
| colanic acid biosynthesis protein | SAMEA3472056_04110 | Not Available | Negative | 4175521 - 4176801 | 47326.4 |
| putative flippase (putative export protein) | SAMEA3472056_04111 | Not Available | Negative | 4177077 - 4178555 | 53608.9 |
| putative colanic biosynthesis udp-glucose lipid carrier transferase | SAMEA3472056_04112 | Not Available | Negative | 4178557 - 4179951 | 52397.5 |
| phosphomannomutase cpsg | SAMEA3472056_04113 | Not Available | Negative | 4180087 - 4181457 | 50393.4 |
| mannose-1-phosphate guanylyltransferase | SAMEA3472056_04114 | Not Available | Negative | 4181650 - 4183086 | 53020.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





