Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| toxin | SAMEA3472056_04083 | Not Available | Negative | 4150081 - 4150335 | 10216.1 |
| antitoxin yefm | SAMEA3472056_04084 | Not Available | Negative | 4150332 - 4150583 | 9308.13 |
| atp phosphoribosyltransferase | SAMEA3472056_04086 | Not Available | Positive | 4151062 - 4151961 | 33368.8 |
| histidinol dehydrogenase | SAMEA3472056_04087 | Not Available | Positive | 4151967 - 4153271 | 46035.8 |
| histidinol-phosphate aminotransferase | SAMEA3472056_04088 | Not Available | Positive | 4153268 - 4154338 | 39400.4 |
| imidazole glycerol-phosphate dehydratase/histidinol phosphatase | SAMEA3472056_04089 | Not Available | Positive | 4154338 - 4155405 | 40239.3 |
| imidazole glycerol phosphate synthase subunit | SAMEA3472056_04090 | Not Available | Positive | 4155405 - 4155995 | 21640.1 |
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase | SAMEA3472056_04091 | Not Available | Positive | 4155995 - 4156732 | 26046.2 |
| imidazole glycerol phosphate synthase subunit | SAMEA3472056_04092 | Not Available | Positive | 4156714 - 4157490 | 28442.0 |
| histidine biosynthesis bifunctional protein | SAMEA3472056_04093 | Not Available | Positive | 4157484 - 4158095 | 22815.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





