Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| periplasmic nitrate reductase | SAMEA3472056_04062 | Not Available | Negative | 4132599 - 4135085 | 93062.0 |
| napd protein | SAMEA3472056_04063 | Not Available | Negative | 4135082 - 4135345 | 9469.03 |
| ferredoxin-type protein | SAMEA3472056_04064 | Not Available | Negative | 4135335 - 4135829 | 18048.3 |
| uncharacterised protein | SAMEA3472056_04065 | Not Available | Positive | 4135938 - 4136102 | 6289.74 |
| ecotin | SAMEA3472056_04066 | Not Available | Positive | 4136236 - 4136724 | 18166.0 |
| putative dna repair protein | SAMEA3472056_04067 | Not Available | Positive | 4137143 - 4137619 | 17662.4 |
| cp4-44 prophage | SAMEA3472056_04068 | Not Available | Positive | 4137688 - 4137909 | 8411.2 |
| antitoxin of the yeev-yeeu toxin-antitoxin system | SAMEA3472056_04069 | Not Available | Positive | 4137983 - 4138351 | 13626.3 |
| toxin of the yeev-yeeu toxin-antitoxin system | SAMEA3472056_04070 | Not Available | Positive | 4138440 - 4138703 | 9555.51 |
| cp4-44 prophage | SAMEA3472056_04071 | Not Available | Positive | 4138810 - 4139004 | 6985.29 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





