Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c-type biogenesis protein | SAMEA3472056_04052 | Not Available | Negative | 4125293 - 4127236 | 71375.6 |
| cytochrome c-type biogenesis protein | SAMEA3472056_04053 | Not Available | Negative | 4127233 - 4127712 | 17699.4 |
| heme exporter protein d (cytochrome c-type biogenesis protein) | SAMEA3472056_04054 | Not Available | Negative | 4127709 - 4127918 | 7745.59 |
| heme exporter protein c | SAMEA3472056_04055 | Not Available | Negative | 4127915 - 4128652 | 27886.9 |
| heme exporter protein b | SAMEA3472056_04056 | Not Available | Negative | 4128694 - 4129356 | 23620.3 |
| heme exporter atp-binding protein (cytochrome c-type biogenesis protein) | SAMEA3472056_04057 | Not Available | Negative | 4129353 - 4129970 | 22894.4 |
| cytochrome c-type protein | SAMEA3472056_04058 | Not Available | Negative | 4129989 - 4130591 | 23101.8 |
| citrate reductase cytochrome c-type subunit | SAMEA3472056_04059 | Not Available | Negative | 4130601 - 4131050 | 16297.4 |
| ferredoxin-type protein naph | SAMEA3472056_04060 | Not Available | Negative | 4131047 - 4131910 | 31895.3 |
| ferredoxin-type protein | SAMEA3472056_04061 | Not Available | Negative | 4131897 - 4132592 | 24940.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





