Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Tail tube protein | SAMEA3472056_03470 | Not Available | Positive | 3462636 - 3463154 | 19069.8 |
| Tail protein | SAMEA3472056_03471 | Not Available | Positive | 3463211 - 3463486 | 9676.98 |
| Tail length determinator | SAMEA3472056_03472 | Not Available | Positive | 3463631 - 3466078 | 86489.6 |
| Tail protein | SAMEA3472056_03473 | Not Available | Positive | 3466093 - 3466572 | 17475.3 |
| Gene d protein | SAMEA3472056_03474 | Not Available | Positive | 3466572 - 3467735 | 42774.0 |
| Putative positive regulator of late gene transcription | SAMEA3472056_03475 | Not Available | Positive | 3467817 - 3468035 | 8402.08 |
| Attr | Not Available | Not Available | Positive | 3468147 - 3468193 | Not Available |
| Putative positive regulator of late gene transcription | SAMEA3472056_04153 | Not Available | Negative | 4226471 - 4226689 | 8402.08 |
| Tail protein | SAMEA3472056_04154 | Not Available | Negative | 4226771 - 4227934 | 42815.0 |
| Tail protein | SAMEA3472056_04155 | Not Available | Negative | 4227934 - 4228413 | 17469.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





