Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| colicin i tonb-dependent receptor | SAMEA3472056_04012 | Not Available | Negative | 4079734 - 4080531 | 29190.1 |
| lysine transporter | SAMEA3472056_04013 | Not Available | Negative | 4080823 - 4082292 | 53565.0 |
| lysr family transcriptional regulator | SAMEA3472056_04014 | Not Available | Negative | 4082497 - 4083303 | 29997.4 |
| inner membrane protein | SAMEA3472056_04015 | Not Available | Positive | 4083477 - 4084526 | 36884.3 |
| endonuclease iv | SAMEA3472056_04016 | Not Available | Positive | 4084600 - 4085457 | 31463.2 |
| putative pyrimidine kinase | SAMEA3472056_04017 | Not Available | Positive | 4085460 - 4086548 | 39560.5 |
| putative nucleoside transporter | SAMEA3472056_04018 | Not Available | Negative | 4086604 - 4087854 | 43426.3 |
| pyrimidine-specific ribonucleoside hydrolase (cytidine/uridine-specific hydrolase) | SAMEA3472056_04019 | Not Available | Negative | 4087954 - 4088895 | 33768.1 |
| dna-binding transcriptional activator yeil | SAMEA3472056_04020 | Not Available | Positive | 4089025 - 4089723 | 26835.6 |
| putative nucleoside transporter | SAMEA3472056_04021 | Not Available | Negative | 4089791 - 4091041 | 43464.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





