Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative oxidoreductase | SAMEA3472056_04002 | Not Available | Positive | 4067979 - 4069217 | 44340.1 |
| dihydropyrimidine dehydrogenase | SAMEA3472056_04003 | Not Available | Positive | 4069211 - 4070446 | 45071.4 |
| galactoside abc transporter, permease protein | SAMEA3472056_04004 | Not Available | Negative | 4070517 - 4071527 | 35552.4 |
| galactose/methyl galactoside abc transporter, atp-binding protein | SAMEA3472056_04005 | Not Available | Negative | 4071543 - 4073063 | 56418.8 |
| d-galactose abc transporter, substrate-binding protein | SAMEA3472056_04006 | Not Available | Negative | 4073124 - 4074122 | 35714.5 |
| dna-binding transcriptional regulator gals | SAMEA3472056_04007 | Not Available | Negative | 4074402 - 4075442 | 37389.1 |
| putative membrane protein yeib | SAMEA3472056_04008 | Not Available | Negative | 4075584 - 4076741 | 43368.1 |
| gtp cyclohydrolase i fole | SAMEA3472056_04009 | Not Available | Negative | 4076758 - 4077426 | 24832.1 |
| putative esterase | SAMEA3472056_04010 | Not Available | Positive | 4077684 - 4078520 | 31344.0 |
| colicin i tonb-dependent receptor | SAMEA3472056_04011 | Not Available | Negative | 4078552 - 4079565 | 37735.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





