Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multiple antibiotic resistance regulatory protein | SAMEA3472056_03948 | Not Available | Positive | 4009790 - 4010224 | 16070.0 |
| dna-binding transcriptional activator mara | SAMEA3472056_03949 | Not Available | Positive | 4010244 - 4010627 | 15185.0 |
| multiple antibiotic resistance protein | SAMEA3472056_03950 | Not Available | Positive | 4010659 - 4010877 | 7573.05 |
| amino acid metabolite efflux | SAMEA3472056_03951 | Not Available | Negative | 4010908 - 4011807 | 32274.1 |
| major facilitator superfamily protein | SAMEA3472056_03952 | Not Available | Positive | 4012002 - 4013189 | 42606.4 |
| putative signal transduction protein | SAMEA3472056_03954 | Not Available | Negative | 4013630 - 4014520 | 33807.4 |
| stress response protein | SAMEA3472056_03955 | Not Available | Negative | 4014775 - 4015167 | 14121.9 |
| competence damage-inducible protein a | SAMEA3472056_03956 | Not Available | Positive | 4015443 - 4015961 | 18265.8 |
| dipeptidyl carboxypeptidase ii | SAMEA3472056_03957 | Not Available | Negative | 4016006 - 4018051 | 77502.8 |
| nadp-dependent l-serine/l-allo-threonine dehydrogenase | SAMEA3472056_03958 | Not Available | Positive | 4018188 - 4018934 | 27234.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





