Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| altronate oxidoreductase | SAMEA3472056_03938 | Not Available | Negative | 3999400 - 4000851 | 54811.3 |
| uncharacterised protein | SAMEA3472056_03939 | Not Available | Negative | 4000904 - 4001050 | 5609.12 |
| putative signal transduction protein | SAMEA3472056_03940 | Not Available | Negative | 4001078 - 4002496 | 52184.5 |
| putative cytoplasmic protein | SAMEA3472056_03941 | Not Available | Negative | 4002635 - 4002994 | 13544.5 |
| glutaminase 2 | SAMEA3472056_03942 | Not Available | Negative | 4002994 - 4003920 | 33517.6 |
| succinate semialdehyde dehydrogenase | SAMEA3472056_03943 | Not Available | Negative | 4003984 - 4005372 | 49758.7 |
| transcriptional regulator ynej | SAMEA3472056_03944 | Not Available | Positive | 4005473 - 4006354 | 32457.9 |
| protein | SAMEA3472056_03945 | Not Available | Positive | 4006432 - 4007547 | 42866.6 |
| sugar efflux transporter | SAMEA3472056_03946 | Not Available | Positive | 4007698 - 4008888 | 42526.8 |
| multiple antibiotic resistance protein | SAMEA3472056_03947 | Not Available | Negative | 4008913 - 4009578 | 23602.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





