Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Baseplate assembly protein j | SAMEA3472056_03460 | Not Available | Positive | 3455264 - 3456172 | 32739.7 |
| Tail fibers protein | SAMEA3472056_03461 | Not Available | Positive | 3456165 - 3456776 | 22537.9 |
| Tail fiber protein | SAMEA3472056_03462 | Not Available | Positive | 3456773 - 3457951 | 41840.9 |
| Tail fiber assembly protein | SAMEA3472056_03463 | Not Available | Positive | 3457973 - 3458413 | 16494.1 |
| Putative tail fiber assembly protein | SAMEA3472056_03464 | Not Available | Negative | 3458385 - 3458987 | 21759.2 |
| Variable tail fiber protein | SAMEA3472056_03465 | Not Available | Negative | 3458987 - 3460036 | 37206.5 |
| Dna invertase | SAMEA3472056_03466 | Not Available | Positive | 3460067 - 3460660 | 22085.9 |
| Phage tail sheath protein fi | SAMEA3472056_03467 | Not Available | Positive | 3460720 - 3460944 | 7313.76 |
| Dna invertase | SAMEA3472056_03468 | Not Available | Positive | 3461077 - 3461373 | 10957.4 |
| Phage tail sheath protein fi | SAMEA3472056_03469 | Not Available | Positive | 3461433 - 3462623 | 43083.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





