Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i secretion system protein | SAMEA3472056_03865 | Not Available | Negative | 3884394 - 3884579 | 6814.23 |
| adhesin for cattle intestine colonization | SAMEA3472056_03866 | Not Available | Negative | 3884576 - 3905926 | 712581.0 |
| putative type i secretion protein | SAMEA3472056_03867 | Not Available | Negative | 3906029 - 3907384 | 49276.9 |
| putative amino acid permease | SAMEA3472056_03868 | Not Available | Negative | 3907722 - 3909014 | 45645.5 |
| glutaminase 1 | SAMEA3472056_03869 | Not Available | Negative | 3909017 - 3909949 | 32849.1 |
| copper-transporting p-type atpase | SAMEA3472056_03870 | Not Available | Positive | 3910211 - 3912715 | 88010.5 |
| transposase | SAMEA3472056_03871 | Not Available | Positive | 3912897 - 3913418 | 20135.2 |
| uncharacterised protein | SAMEA3472056_03872 | Not Available | Positive | 3913942 - 3914340 | 15074.2 |
| rna-directed dna polymerase | SAMEA3472056_03874 | Not Available | Positive | 3914979 - 3915863 | 33701.5 |
| h repeat-associated protein | SAMEA3472056_03876 | Not Available | Positive | 3916503 - 3917621 | 42400.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





