Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metal resistance protein | SAMEA3472056_03855 | Not Available | Negative | 3877480 - 3878259 | 28166.5 |
| abc transporter atp-binding protein ybbl | SAMEA3472056_03856 | Not Available | Negative | 3878246 - 3878923 | 25383.5 |
| protease, membrane anchored | SAMEA3472056_03857 | Not Available | Positive | 3879069 - 3879986 | 33745.1 |
| nodulation efficiency family protein | SAMEA3472056_03858 | Not Available | Positive | 3879983 - 3880441 | 16926.0 |
| uncharacterised protein | SAMEA3472056_03859 | Not Available | Negative | 3880544 - 3880906 | 14184.0 |
| adhesin/invasin-like protein | SAMEA3472056_03860 | Not Available | Positive | 3881273 - 3882289 | 35993.3 |
| putative lipoprotein | SAMEA3472056_03861 | Not Available | Positive | 3882374 - 3882796 | 15215.2 |
| uncharacterised protein | SAMEA3472056_03862 | Not Available | Positive | 3882793 - 3882996 | 7500.42 |
| dna-binding transcriptional regulator cuer | SAMEA3472056_03863 | Not Available | Negative | 3883000 - 3883407 | 15235.1 |
| type i secretion system protein | SAMEA3472056_03864 | Not Available | Negative | 3883404 - 3884360 | 35540.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





