Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidyl-prolyl cis-trans isomerase b | SAMEA3472056_03824 | Not Available | Positive | 3841658 - 3842152 | 18168.5 |
| udp-2,3-diacylglucosamine hydrolase | SAMEA3472056_03825 | Not Available | Positive | 3842155 - 3842877 | 26895.7 |
| phosphoribosylaminoimidazole carboxylase catalytic subunit | SAMEA3472056_03826 | Not Available | Positive | 3842995 - 3843504 | 17781.3 |
| phosphoribosylaminoimidazole carboxylase atpase subunit | SAMEA3472056_03827 | Not Available | Positive | 3843501 - 3844568 | 39461.3 |
| carbamate kinase | SAMEA3472056_03828 | Not Available | Negative | 3844707 - 3845600 | 31660.0 |
| putative carboxylase | SAMEA3472056_03829 | Not Available | Negative | 3845597 - 3846412 | 29598.8 |
| putative cytoplasmic protein | SAMEA3472056_03830 | Not Available | Negative | 3846423 - 3847682 | 44911.7 |
| fdra protein | SAMEA3472056_03831 | Not Available | Negative | 3847692 - 3849359 | 58522.3 |
| ureidoglycolate dehydrogenase | SAMEA3472056_03832 | Not Available | Positive | 3849676 - 3850725 | 37893.2 |
| allantoate amidohydrolase | SAMEA3472056_03833 | Not Available | Positive | 3850747 - 3851982 | 45631.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





