Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Holin | SAMEA3472056_03450 | Not Available | Positive | 3450688 - 3450969 | 9787.61 |
| Endolysin | SAMEA3472056_03451 | Not Available | Positive | 3450969 - 3451466 | 18539.1 |
| Phage holin | SAMEA3472056_03452 | Not Available | Positive | 3451481 - 3451906 | 15550.7 |
| Lysb | SAMEA3472056_03453 | Not Available | Positive | 3451894 - 3452316 | 15697.9 |
| Hypothetical protein | SAMEA3472056_03454 | Not Available | Positive | 3452306 - 3452464 | 5639.49 |
| Tail completion protein | SAMEA3472056_03455 | Not Available | Positive | 3452427 - 3452894 | 17423.8 |
| Tail completion protein | SAMEA3472056_03456 | Not Available | Positive | 3452887 - 3453339 | 17241.9 |
| Hypothetical protein | SAMEA3472056_03457 | Not Available | Negative | 3453411 - 3454196 | 30438.5 |
| Baseplate assembly protein v | SAMEA3472056_03458 | Not Available | Positive | 3454280 - 3454915 | 22302.7 |
| Baseplate wedge subunit | SAMEA3472056_03459 | Not Available | Positive | 3454912 - 3455259 | 12668.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





