Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterised protein | SAMEA3472056_03804 | Not Available | Positive | 3819232 - 3819669 | 16546.6 |
| rhs core protein | SAMEA3472056_03805 | Not Available | Positive | 3819858 - 3821600 | 66095.6 |
| uncharacterised protein | SAMEA3472056_03806 | Not Available | Positive | 3821614 - 3822147 | 20711.5 |
| putative rhs core protein | SAMEA3472056_03807 | Not Available | Positive | 3822236 - 3822706 | 17892.7 |
| h repeat-associated protein | SAMEA3472056_03808 | Not Available | Positive | 3822810 - 3823946 | 43294.1 |
| bacteriophage n4 adsorption protein b | SAMEA3472056_03809 | Not Available | Positive | 3824212 - 3826449 | 85324.3 |
| bacteriophage n4 receptor, outer membrane subunit | SAMEA3472056_03810 | Not Available | Positive | 3826436 - 3829408 | 111399.0 |
| uncharacterised protein | SAMEA3472056_03811 | Not Available | Positive | 3829409 - 3830299 | 33076.6 |
| porin thermoregulatory protein | SAMEA3472056_03812 | Not Available | Positive | 3830482 - 3831243 | 28992.5 |
| Trna-arg | Not Available | Not Available | Positive | 3831289 - 3831365 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





