Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase | SAMEA3472056_03701 | Not Available | Negative | 3711458 - 3711583 | 4878.16 |
| uncharacterised protein | SAMEA3472056_03702 | Not Available | Negative | 3711633 - 3712010 | 13905.4 |
| uncharacterised protein | SAMEA3472056_03703 | Not Available | Negative | 3712420 - 3712791 | 13893.2 |
| uncharacterised protein | SAMEA3472056_03704 | Not Available | Negative | 3712852 - 3713349 | 18022.8 |
| aminoglycoside adenylyltransferase | SAMEA3472056_03705 | Not Available | Negative | 3713425 - 3714213 | 29204.8 |
| tdp-fucosamine acetyltransferase | SAMEA3472056_03706 | Not Available | Negative | 3714271 - 3714795 | 19671.9 |
| dihydrofolate reductase type i dhfra1 | SAMEA3472056_03707 | Not Available | Negative | 3714986 - 3715459 | 17576.1 |
| class 1 integron integrase protein inti1 | SAMEA3472056_03708 | Not Available | Positive | 3715791 - 3716327 | 20469.1 |
| class 1 integron integrase protein inti1 | SAMEA3472056_03709 | Not Available | Positive | 3716442 - 3716768 | 12012.6 |
| phosphate abc transporter substrate-binding protein | SAMEA3472056_03710 | Not Available | Positive | 3717998 - 3719038 | 37079.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





