Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane-bound atp synthase f1 sector gamma-subunit | SAMEA3472056_03690 | Not Available | Positive | 3697092 - 3697955 | 31579.3 |
| atp synthase subunit beta | SAMEA3472056_03691 | Not Available | Positive | 3697982 - 3699364 | 50328.5 |
| membrane-bound atp synthase | SAMEA3472056_03692 | Not Available | Positive | 3699385 - 3699804 | 15069.2 |
| bifunctional protein glmu | SAMEA3472056_03694 | Not Available | Positive | 3700155 - 3701525 | 49207.1 |
| glucosamine--fructose-6-phosphate aminotransferase | SAMEA3472056_03695 | Not Available | Positive | 3701687 - 3703516 | 66870.3 |
| tn7-like transposase tnsa | SAMEA3472056_03696 | Not Available | Positive | 3703676 - 3704497 | 31258.4 |
| tn7-like transposition protein tnsb | SAMEA3472056_03697 | Not Available | Positive | 3704484 - 3706592 | 80829.0 |
| tn7-like transposition protein tnsc | SAMEA3472056_03698 | Not Available | Positive | 3706589 - 3708256 | 62998.3 |
| uncharacterised protein | SAMEA3472056_03699 | Not Available | Positive | 3708259 - 3709785 | 59143.0 |
| uncharacterised protein | SAMEA3472056_03700 | Not Available | Positive | 3709786 - 3711402 | 61215.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





