Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| penicillin-binding protein | SAMEA3472056_03648 | Not Available | Positive | 3650759 - 3651916 | 41851.5 |
| dna-binding transcriptional regulator | SAMEA3472056_03649 | Not Available | Negative | 3651917 - 3652540 | 23957.1 |
| flagellin structural protein | SAMEA3472056_03650 | Not Available | Negative | 3652628 - 3655570 | 105199.0 |
| delta-aminolevulinic acid dehydratase | SAMEA3472056_03651 | Not Available | Positive | 3656095 - 3657069 | 35626.8 |
| alpha-ketoglutarate-dependent taurine dioxygenase | SAMEA3472056_03652 | Not Available | Negative | 3657176 - 3658027 | 32453.3 |
| taurine abc transporter permease | SAMEA3472056_03653 | Not Available | Negative | 3658024 - 3658851 | 29574.5 |
| taurine abc transporter atp-binding protein | SAMEA3472056_03654 | Not Available | Negative | 3658848 - 3659615 | 28312.5 |
| taurine transporter substrate binding subunit | SAMEA3472056_03655 | Not Available | Negative | 3659628 - 3660590 | 34267.9 |
| putative response regulator | SAMEA3472056_03656 | Not Available | Positive | 3660893 - 3661522 | 22813.6 |
| putative sensor histidine protein kinase (uhpb-like) | SAMEA3472056_03657 | Not Available | Positive | 3661522 - 3663063 | 57949.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





