Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter araj | SAMEA3472056_03628 | Not Available | Positive | 3632286 - 3633554 | 44640.5 |
| fructokinase | SAMEA3472056_03629 | Not Available | Negative | 3633688 - 3634596 | 32497.6 |
| exonuclease rdgc | SAMEA3472056_03630 | Not Available | Positive | 3634655 - 3635632 | 36551.5 |
| uncharacterised protein | SAMEA3472056_03631 | Not Available | Negative | 3635710 - 3636165 | 17834.5 |
| protein involved in detoxification of methylglyoxal | SAMEA3472056_03632 | Not Available | Negative | 3636162 - 3638441 | 86743.7 |
| conserved protein, upf0345 family | SAMEA3472056_03633 | Not Available | Negative | 3638585 - 3638869 | 10234.9 |
| putative chorismate biosynthesis protein | SAMEA3472056_03634 | Not Available | Negative | 3638941 - 3639618 | 24918.5 |
| protein | SAMEA3472056_03635 | Not Available | Negative | 3639876 - 3640067 | 7281.55 |
| shikimate kinase | SAMEA3472056_03636 | Not Available | Negative | 3640117 - 3640641 | 19151.9 |
| putative cytoplasmic protein | SAMEA3472056_03637 | Not Available | Negative | 3640824 - 3641282 | 16970.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





