Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| repressor cpxp | SAMEA3472056_03431 | Not Available | Positive | 3434822 - 3435322 | 18966.4 |
| Attl | Not Available | Not Available | Positive | 3435346 - 3435392 | Not Available |
| Phage integrase | SAMEA3472056_03432 | Not Available | Negative | 3435509 - 3436489 | 36987.0 |
| C protein | SAMEA3472056_03433 | Not Available | Negative | 3436559 - 3436852 | 10553.8 |
| Cox | SAMEA3472056_03434 | Not Available | Positive | 3436989 - 3437261 | 10459.7 |
| Gpb | SAMEA3472056_03435 | Not Available | Positive | 3437431 - 3437931 | 20040.2 |
| Hypothetical protein | SAMEA3472056_03436 | Not Available | Positive | 3437995 - 3438219 | 8278.91 |
| Hypothetical protein | SAMEA3472056_03437 | Not Available | Positive | 3438219 - 3438521 | 11328.8 |
| Gp82 | SAMEA3472056_03438 | Not Available | Positive | 3438521 - 3438745 | 8293.9 |
| Gp83 | SAMEA3472056_03439 | Not Available | Positive | 3438742 - 3439017 | 10168.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





