Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thioesterase protein ybaw | SAMEA3472056_03577 | Not Available | Negative | 3576566 - 3576964 | 15089.2 |
| putative dna uptake protein | SAMEA3472056_03578 | Not Available | Negative | 3577070 - 3577441 | 12704.4 |
| peptidyl-prolyl cis-trans isomerase d | SAMEA3472056_03579 | Not Available | Negative | 3577592 - 3579463 | 68153.7 |
| dna-binding protein hu | SAMEA3472056_03580 | Not Available | Negative | 3579655 - 3579927 | 9226.08 |
| dna-binding atp-dependent protease la | SAMEA3472056_03581 | Not Available | Negative | 3580136 - 3582490 | 87457.4 |
| atp-dependent specificity component of clpp serine protease | SAMEA3472056_03583 | Not Available | Negative | 3582678 - 3583952 | 46358.7 |
| atp-dependent clp protease proteolytic subunit | SAMEA3472056_03584 | Not Available | Negative | 3584083 - 3584706 | 23188.1 |
| trigger factor | SAMEA3472056_03585 | Not Available | Negative | 3584953 - 3586251 | 48195.4 |
| putative transcriptional regulator | SAMEA3472056_03586 | Not Available | Negative | 3586595 - 3586909 | 11863.1 |
| lipoprotein yajg precursor | SAMEA3472056_03587 | Not Available | Positive | 3587217 - 3587795 | 20951.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





