Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidoglycan peptidase | SAMEA3472056_03501 | Not Available | Negative | 3490621 - 3491229 | 23204.9 |
| transcriptional repressor protein metj | SAMEA3472056_03502 | Not Available | Negative | 3491413 - 3491730 | 12141.4 |
| cystathionine gamma-synthase | SAMEA3472056_03503 | Not Available | Positive | 3492007 - 3493167 | 41552.8 |
| bifunctional aspartokinase/homoserine dehydrogenase ii] | SAMEA3472056_03504 | Not Available | Positive | 3493170 - 3495602 | 88922.8 |
| 5,10-methylenetetrahydrofolate reductase | SAMEA3472056_03505 | Not Available | Positive | 3495951 - 3496841 | 33104.5 |
| peroxidase/catalase hpi | SAMEA3472056_03506 | Not Available | Positive | 3497170 - 3499350 | 80072.0 |
| transporter | SAMEA3472056_03507 | Not Available | Positive | 3499444 - 3500349 | 32853.4 |
| uncharacterized protein conserved in bacteria | SAMEA3472056_03508 | Not Available | Negative | 3500376 - 3500993 | 22929.2 |
| glycerol dehydrogenase | SAMEA3472056_03509 | Not Available | Negative | 3501267 - 3502370 | 38714.4 |
| fructose-6-phosphate aldolase 2 | SAMEA3472056_03510 | Not Available | Negative | 3502381 - 3503043 | 23556.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





