Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l rhamnose-proton symporter | SAMEA3472056_03425 | Not Available | Negative | 3428493 - 3429527 | 37308.1 |
| mn dependent superoxide dismutase | SAMEA3472056_03426 | Not Available | Positive | 3429812 - 3430432 | 23080.2 |
| 2-keto-3-deoxygluconate permease | SAMEA3472056_03427 | Not Available | Positive | 3430692 - 3431675 | 33685.4 |
| mosc domain-containing protein | SAMEA3472056_03428 | Not Available | Positive | 3431824 - 3432498 | 25326.0 |
| two-component sensor kinase | SAMEA3472056_03429 | Not Available | Negative | 3432604 - 3433977 | 51597.3 |
| ferrous-iron efflux pump | SAMEA3472056_03476 | Not Available | Positive | 3468272 - 3469174 | 32929.2 |
| uncharacterised protein | SAMEA3472056_03477 | Not Available | Negative | 3469120 - 3469224 | 3760.34 |
| 6-phosphofructokinase | SAMEA3472056_03478 | Not Available | Positive | 3469355 - 3470317 | 34844.2 |
| sulfate-binding protein (sulfate starvation-induced protein 2) | SAMEA3472056_03479 | Not Available | Positive | 3470636 - 3471625 | 36721.2 |
| cdp-diacylglycerol pyrophosphatase | SAMEA3472056_03480 | Not Available | Positive | 3471732 - 3472487 | 28430.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





