Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator | SAMEA3472056_03404 | Not Available | Positive | 3405852 - 3406142 | 10847.1 |
| copg-family dna-binding protein | SAMEA3472056_03405 | Not Available | Positive | 3406726 - 3406944 | 8424.19 |
| yiif protein | SAMEA3472056_03406 | Not Available | Positive | 3407163 - 3407405 | 9378.09 |
| enterobactin synthetase component d | SAMEA3472056_03407 | Not Available | Positive | 3407405 - 3407587 | 6295.65 |
| putative formate dehydrogenase formation protein | SAMEA3472056_03408 | Not Available | Negative | 3407735 - 3408664 | 34660.5 |
| formate dehydrogenase, cytochrome b556(fdo) subunit | SAMEA3472056_03409 | Not Available | Negative | 3408661 - 3409296 | 24593.7 |
| formate dehydrogenase-o | SAMEA3472056_03410 | Not Available | Negative | 3409293 - 3410195 | 33102.1 |
| formate dehydrogenase accessory protein | SAMEA3472056_03412 | Not Available | Positive | 3413452 - 3414285 | 30533.8 |
| putative lipoprotein | SAMEA3472056_03413 | Not Available | Positive | 3414438 - 3415493 | 39295.4 |
| frv operon regulatory protein | SAMEA3472056_03414 | Not Available | Negative | 3415595 - 3417343 | 65993.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





