Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gntr family transcriptional regulator | SAMEA3472056_03384 | Not Available | Positive | 3383248 - 3383958 | 26897.2 |
| putative sugar isomerase | SAMEA3472056_03385 | Not Available | Positive | 3383966 - 3384946 | 36973.0 |
| major facilitator superfamily protein | SAMEA3472056_03386 | Not Available | Positive | 3385048 - 3386313 | 46382.0 |
| outer membrane porin l | SAMEA3472056_03387 | Not Available | Negative | 3386404 - 3387162 | 29311.4 |
| permease | SAMEA3472056_03388 | Not Available | Negative | 3387163 - 3388566 | 51540.9 |
| putative transporter | SAMEA3472056_03389 | Not Available | Negative | 3388606 - 3389991 | 51026.1 |
| putative glycosyl hydrolase | SAMEA3472056_03390 | Not Available | Negative | 3390037 - 3392073 | 77364.1 |
| putative permease | SAMEA3472056_03391 | Not Available | Negative | 3392182 - 3393057 | 31210.7 |
| aldose-1-epimerase | SAMEA3472056_03392 | Not Available | Negative | 3393118 - 3394020 | 33119.5 |
| putative n-acylglucosamine 2-epimerase | SAMEA3472056_03393 | Not Available | Negative | 3394088 - 3395329 | 47402.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





