Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyltransferase | SAMEA3472056_03370 | Not Available | Negative | 3368624 - 3369556 | 36275.1 |
| uncharacterised protein | SAMEA3472056_03371 | Not Available | Negative | 3369676 - 3369861 | 7134.79 |
| dna polymerase i | SAMEA3472056_03372 | Not Available | Positive | 3369920 - 3372706 | 103124.0 |
| gtp-binding protein | SAMEA3472056_03374 | Not Available | Negative | 3373088 - 3373720 | 23562.2 |
| gtpase activator | SAMEA3472056_03377 | Not Available | Positive | 3374302 - 3374808 | 18955.2 |
| coproporphyrinogen iii oxidase | SAMEA3472056_03378 | Not Available | Positive | 3374997 - 3376370 | 52732.0 |
| small predicted membrane protein | SAMEA3472056_03379 | Not Available | Negative | 3376560 - 3376670 | 3618.45 |
| nitrogen regulation protein nr(i) | SAMEA3472056_03380 | Not Available | Negative | 3376782 - 3378191 | 52225.8 |
| nitrogen regulation protein nr(ii) (two-component system sensor kinase) | SAMEA3472056_03381 | Not Available | Negative | 3378203 - 3379252 | 38558.5 |
| glutamine synthetase | SAMEA3472056_03382 | Not Available | Negative | 3379426 - 3380835 | 51906.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





