Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trar/dksa family transcriptional regulator | SAMEA3472056_03312 | Not Available | Negative | 3317904 - 3318125 | 8202.89 |
| Hypothetical protein | SAMEA3472056_03313 | Not Available | Negative | 3318125 - 3318352 | 8565.23 |
| Hypothetical protein | SAMEA3472056_03314 | Not Available | Negative | 3318421 - 3318759 | 12821.5 |
| Gp32 | SAMEA3472056_03315 | Not Available | Negative | 3318723 - 3318923 | 7400.9 |
| Regulatory protein cii | SAMEA3472056_03316 | Not Available | Negative | 3318931 - 3319440 | 18742.7 |
| Regulatory protein | SAMEA3472056_03317 | Not Available | Negative | 3319471 - 3319734 | 9781.98 |
| Ci repressor | SAMEA3472056_03318 | Not Available | Positive | 3319864 - 3320439 | 20935.8 |
| Integrase | SAMEA3472056_03319 | Not Available | Positive | 3320439 - 3321437 | 38438.3 |
| uncharacterised protein | SAMEA3472056_03320 | Not Available | Positive | 3321460 - 3322707 | 47869.0 |
| Attr | Not Available | Not Available | Positive | 3322720 - 3322732 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





