Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arsr family transcriptional regulator | SAMEA3472056_03267 | Not Available | Negative | 3277144 - 3277443 | 10596.9 |
| membrane protein | SAMEA3472056_03268 | Not Available | Positive | 3277626 - 3277784 | 5865.57 |
| putative peptidoglycan-binding protein | SAMEA3472056_03269 | Not Available | Positive | 3277868 - 3278317 | 16036.9 |
| gntr family transcriptional regulator | SAMEA3472056_03270 | Not Available | Negative | 3278318 - 3278980 | 25017.3 |
| gamma-aminobutyrate transporter | SAMEA3472056_03271 | Not Available | Negative | 3279001 - 3280401 | 51069.1 |
| 4-aminobutyrate aminotransferase | SAMEA3472056_03272 | Not Available | Negative | 3280640 - 3281920 | 45647.3 |
| succinate-semialdehyde dehydrogenase | SAMEA3472056_03273 | Not Available | Negative | 3281934 - 3283382 | 51820.2 |
| hydroxyglutarate oxidase | SAMEA3472056_03274 | Not Available | Negative | 3283405 - 3284673 | 46072.7 |
| protein csid | SAMEA3472056_03275 | Not Available | Negative | 3284693 - 3285670 | 37387.6 |
| alpha-amylase | SAMEA3472056_03276 | Not Available | Negative | 3286005 - 3288257 | 85351.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





