Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycine betaine/l-proline abc transporter atp-binding protein | SAMEA3472056_03257 | Not Available | Negative | 3268637 - 3269839 | 44165.5 |
| ribonucleoside-diphosphate reductase 2 beta chain | SAMEA3472056_03258 | Not Available | Negative | 3270195 - 3271154 | 36490.1 |
| ribonucleoside-diphosphate reductase 2 alpha chain | SAMEA3472056_03259 | Not Available | Negative | 3271164 - 3273308 | 80430.4 |
| ribonucleotide reductase stimulatory protein | SAMEA3472056_03260 | Not Available | Negative | 3273281 - 3273691 | 15341.3 |
| glutaredoxin-like protein | SAMEA3472056_03261 | Not Available | Negative | 3273688 - 3273933 | 9111.92 |
| protein | SAMEA3472056_03262 | Not Available | Negative | 3274181 - 3274510 | 11847.9 |
| protein | SAMEA3472056_03263 | Not Available | Positive | 3274662 - 3275006 | 13066.5 |
| inner membrane protein | SAMEA3472056_03264 | Not Available | Negative | 3275043 - 3275492 | 16931.0 |
| dna-binding protein | SAMEA3472056_03265 | Not Available | Positive | 3276159 - 3276563 | 15348.4 |
| inner membrane protein with hydrolase activity | SAMEA3472056_03266 | Not Available | Negative | 3276610 - 3277134 | 18658.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





