Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| recombinase a | SAMEA3472056_03236 | Not Available | Positive | 3250979 - 3252040 | 37975.6 |
| regulatory protein | SAMEA3472056_03237 | Not Available | Positive | 3252283 - 3252783 | 19411.1 |
| alanyl-trna synthetase | SAMEA3472056_03238 | Not Available | Positive | 3252911 - 3255541 | 95993.8 |
| carbon storage regulator | SAMEA3472056_03239 | Not Available | Positive | 3255776 - 3255961 | 6856.34 |
| Trna-ser | Not Available | Not Available | Positive | 3256277 - 3256369 | Not Available |
| Trna-arg | Not Available | Not Available | Positive | 3256373 - 3256449 | Not Available |
| Trna-arg | Not Available | Not Available | Positive | 3256649 - 3256725 | Not Available |
| Trna-arg | Not Available | Not Available | Positive | 3256788 - 3256864 | Not Available |
| putative phosphatase | SAMEA3472056_03244 | Not Available | Positive | 3257145 - 3257711 | 20814.0 |
| inner membrane protein | SAMEA3472056_03245 | Not Available | Positive | 3257708 - 3258136 | 15590.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





