Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxybenzoate decarboxylase subunit b | SAMEA3472056_03196 | Not Available | Positive | 3211557 - 3212150 | 21471.2 |
| 4-hydroxybenzoate decarboxylase subunit c | SAMEA3472056_03197 | Not Available | Positive | 3212150 - 3213577 | 52334.7 |
| 4-hydroxybenzoate decarboxylase subunit d | SAMEA3472056_03198 | Not Available | Positive | 3213588 - 3213824 | 9180.05 |
| serine/threonine-specific protein phosphatase 2 | SAMEA3472056_03199 | Not Available | Negative | 3213865 - 3214521 | 25115.7 |
| dna mismatch repair protein muts | SAMEA3472056_03200 | Not Available | Negative | 3214627 - 3217188 | 95296.5 |
| uncharacterised protein | SAMEA3472056_03201 | Not Available | Negative | 3217185 - 3217418 | 8636.29 |
| protein | SAMEA3472056_03202 | Not Available | Positive | 3217475 - 3217819 | 13535.7 |
| molybdenum-pterin-binding-protein | SAMEA3472056_03203 | Not Available | Negative | 3217858 - 3218286 | 14522.6 |
| formate hydrogenlyase transcriptional activator | SAMEA3472056_03204 | Not Available | Negative | 3218331 - 3220409 | 78414.5 |
| hydrogenase isoenzymes formation protein | SAMEA3472056_03205 | Not Available | Negative | 3220483 - 3221493 | 35140.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





