Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tldd protein | SAMEA3472056_03144 | Not Available | Negative | 3157521 - 3158966 | 51367.2 |
| membrane protein | SAMEA3472056_03145 | Not Available | Negative | 3159122 - 3162922 | 139077.0 |
| ribonuclease g | SAMEA3472056_03146 | Not Available | Negative | 3162990 - 3164459 | 55367.4 |
| maf-like protein | SAMEA3472056_03147 | Not Available | Negative | 3164449 - 3165042 | 21472.7 |
| rod shape-determining protein | SAMEA3472056_03148 | Not Available | Negative | 3165051 - 3165539 | 18788.9 |
| rod shape-determining protein | SAMEA3472056_03149 | Not Available | Negative | 3165539 - 3166642 | 39562.8 |
| rod shape-determining protein mreb | SAMEA3472056_03150 | Not Available | Negative | 3166708 - 3167751 | 36954.7 |
| putative signal transduction protein | SAMEA3472056_03151 | Not Available | Negative | 3168056 - 3169996 | 73373.7 |
| putative zinc-binding dehydrogenase | SAMEA3472056_03152 | Not Available | Positive | 3170148 - 3171122 | 34766.0 |
| biotin carboxyl carrier protein of acetyl-coa carboxylase | SAMEA3472056_03153 | Not Available | Positive | 3172100 - 3172570 | 16688.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





