Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| monofunctional biosynthetic peptidoglycan transglycosylase | SAMEA3472056_03113 | Not Available | Negative | 3123338 - 3123769 | 16377.8 |
| isoprenoid biosynthesis protein with amidotransferase-like domain | SAMEA3472056_03114 | Not Available | Negative | 3123766 - 3124419 | 23010.0 |
| aerobic respiration control protein (bifunctional two-component sensor kinase/response regulator) | SAMEA3472056_03116 | Not Available | Negative | 3124649 - 3126985 | 87988.0 |
| putative radical sam protein | SAMEA3472056_03117 | Not Available | Negative | 3127081 - 3128010 | 34608.6 |
| glutamate synthase subunit alpha | SAMEA3472056_03118 | Not Available | Positive | 3128684 - 3133144 | 163294.0 |
| glutamate synthase (nadph) small subunit | SAMEA3472056_03119 | Not Available | Positive | 3133157 - 3134575 | 52005.3 |
| protein | SAMEA3472056_03120 | Not Available | Positive | 3134759 - 3135886 | 43311.9 |
| beta-galactosidase | SAMEA3472056_03121 | Not Available | Negative | 3135946 - 3136410 | 17037.7 |
| putative transcriptional regulator | SAMEA3472056_03122 | Not Available | Negative | 3136407 - 3137282 | 29637.7 |
| n-acetylmannosamine-6-phosphate 2-epimerase | SAMEA3472056_03123 | Not Available | Negative | 3137279 - 3137968 | 24061.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





