Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Baseplate assembly protein | SAMEA3472056_03292 | Not Available | Negative | 3301711 - 3302058 | 12933.8 |
| Baseplate assembly protein v | SAMEA3472056_03293 | Not Available | Negative | 3302055 - 3302696 | 22679.8 |
| uncharacterised protein | SAMEA3472056_03294 | Not Available | Negative | 3302773 - 3304116 | 51393.0 |
| Virion morphogenesis protein | SAMEA3472056_03295 | Not Available | Negative | 3304154 - 3304621 | 17405.2 |
| Tail completion protein | SAMEA3472056_03296 | Not Available | Negative | 3304614 - 3305081 | 17602.0 |
| Lysb | SAMEA3472056_03297 | Not Available | Negative | 3305189 - 3305602 | 15379.6 |
| Prophage lysozyme | SAMEA3472056_03298 | Not Available | Negative | 3305599 - 3306108 | 18572.6 |
| Holin | SAMEA3472056_03299 | Not Available | Negative | 3306092 - 3306313 | 8375.43 |
| Tail protein | SAMEA3472056_03300 | Not Available | Negative | 3306304 - 3306507 | 7139.45 |
| Head completion-stabilization protein | SAMEA3472056_03301 | Not Available | Negative | 3306507 - 3307007 | 19039.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





