Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar fermentation stimulation protein b | SAMEA3472056_03093 | Not Available | Positive | 3108871 - 3109149 | 10495.6 |
| udp-n-acetylglucosamine l-carboxyvinyltransferase | SAMEA3472056_03094 | Not Available | Negative | 3109197 - 3110456 | 44820.4 |
| bola family transcriptional regulator | SAMEA3472056_03095 | Not Available | Negative | 3110511 - 3110780 | 10038.0 |
| putative anti-sigma factor antagonist | SAMEA3472056_03096 | Not Available | Negative | 3110925 - 3111218 | 10667.0 |
| putative organic solvent tolerance protein | SAMEA3472056_03097 | Not Available | Negative | 3111218 - 3111853 | 23949.9 |
| phospholipid abc transporter substrate-binding protein | SAMEA3472056_03098 | Not Available | Negative | 3111872 - 3112423 | 19577.3 |
| putative organic solvent tolerance protein | SAMEA3472056_03099 | Not Available | Negative | 3112428 - 3113210 | 27865.0 |
| abc transporter atp-binding protein | SAMEA3472056_03100 | Not Available | Negative | 3113218 - 3114027 | 29098.6 |
| calcium/sodium:proton antiporter | SAMEA3472056_03101 | Not Available | Positive | 3114237 - 3115214 | 34770.9 |
| d-arabinose 5-phosphate isomerase | SAMEA3472056_03102 | Not Available | Positive | 3115228 - 3116214 | 35198.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





