Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipoprotein | SAMEA3472056_03049 | Not Available | Positive | 3067506 - 3069542 | 72887.4 |
| endonuclease-like protein | SAMEA3472056_03050 | Not Available | Positive | 3069500 - 3069895 | 14770.4 |
| dnaa initiator-associating protein diaa | SAMEA3472056_03051 | Not Available | Positive | 3069915 - 3070505 | 21107.3 |
| putative phospholipid-binding protein | SAMEA3472056_03052 | Not Available | Positive | 3070515 - 3071090 | 20029.1 |
| permease | SAMEA3472056_03053 | Not Available | Negative | 3071204 - 3072244 | 37257.9 |
| nucleoside-diphosphate-sugar epimerase | SAMEA3472056_03054 | Not Available | Negative | 3072317 - 3072952 | 23228.3 |
| putative general stress protein | SAMEA3472056_03055 | Not Available | Positive | 3073080 - 3073598 | 18845.4 |
| conserved protein, upf0306 family | SAMEA3472056_03056 | Not Available | Negative | 3073578 - 3074021 | 16749.2 |
| giy-yig nuclease superfamily protein | SAMEA3472056_03057 | Not Available | Positive | 3074072 - 3074374 | 11242.5 |
| putative acetyltransferase | SAMEA3472056_03058 | Not Available | Negative | 3074361 - 3074864 | 18534.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





