Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| threonine/serine transporter | SAMEA3472056_03018 | Not Available | Negative | 3035729 - 3037060 | 48881.8 |
| catabolic threonine dehydratase | SAMEA3472056_03019 | Not Available | Negative | 3037082 - 3038071 | 35218.5 |
| tdc operon transcriptional activator | SAMEA3472056_03020 | Not Available | Negative | 3038170 - 3039108 | 34540.9 |
| protein | SAMEA3472056_03021 | Not Available | Positive | 3039897 - 3040436 | 20550.5 |
| uncharacterised protein | SAMEA3472056_03022 | Not Available | Positive | 3040458 - 3041645 | 45222.4 |
| glycerate kinase | SAMEA3472056_03024 | Not Available | Negative | 3042442 - 3043587 | 39122.7 |
| tartronate semialdehyde reductase | SAMEA3472056_03025 | Not Available | Negative | 3043684 - 3044574 | 30661.6 |
| 2-dehydro-3-deoxyglucarate aldolase | SAMEA3472056_03026 | Not Available | Negative | 3044604 - 3045374 | 27388.6 |
| galactarate transporter | SAMEA3472056_03027 | Not Available | Negative | 3045390 - 3046724 | 49012.0 |
| galactarate dehydratase | SAMEA3472056_03028 | Not Available | Positive | 3047099 - 3048670 | 56390.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





