Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inner membrane protein | SAMEA3472056_03008 | Not Available | Positive | 3024954 - 3025310 | 13456.7 |
| lysr family transcriptional regulator | SAMEA3472056_03009 | Not Available | Negative | 3025361 - 3026257 | 33231.3 |
| pirin-related protein | SAMEA3472056_03010 | Not Available | Positive | 3026362 - 3027063 | 25897.0 |
| protein | SAMEA3472056_03011 | Not Available | Positive | 3027086 - 3027250 | 5907.01 |
| putative inner membrane protein | SAMEA3472056_03012 | Not Available | Negative | 3027384 - 3028694 | 45332.8 |
| transporter | SAMEA3472056_03013 | Not Available | Negative | 3028722 - 3030053 | 48317.6 |
| l-serine dehydratase | SAMEA3472056_03014 | Not Available | Negative | 3030328 - 3031692 | 48529.6 |
| tdcf protein | SAMEA3472056_03015 | Not Available | Negative | 3031764 - 3032153 | 14008.0 |
| keto-acid formate acetyltransferase | SAMEA3472056_03016 | Not Available | Negative | 3032167 - 3034461 | 85982.4 |
| propionate kinase/acetate kinase c, anaerobic | SAMEA3472056_03017 | Not Available | Negative | 3034495 - 3035703 | 43416.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





