Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional repressor exur | SAMEA3472056_02998 | Not Available | Positive | 3018637 - 3019413 | 29867.3 |
| deda family membrane protein | SAMEA3472056_02999 | Not Available | Positive | 3019758 - 3020420 | 24587.0 |
| envz/ompr regulon moderator | SAMEA3472056_03000 | Not Available | Positive | 3020424 - 3020807 | 14164.0 |
| protein yqjc precursor | SAMEA3472056_03001 | Not Available | Positive | 3020954 - 3021322 | 13906.4 |
| membrane-anchored ribosome-binding protein | SAMEA3472056_03002 | Not Available | Positive | 3021360 - 3021665 | 11052.1 |
| inner membrane protein | SAMEA3472056_03003 | Not Available | Positive | 3021668 - 3022072 | 15148.0 |
| cell division mukb-like protein | SAMEA3472056_03004 | Not Available | Positive | 3022062 - 3022361 | 11781.4 |
| doxx family protein | SAMEA3472056_03005 | Not Available | Positive | 3022457 - 3022939 | 17216.6 |
| putative glutathione s-transferase | SAMEA3472056_03006 | Not Available | Positive | 3023078 - 3024064 | 37468.1 |
| inner membrane protein yhah | SAMEA3472056_03007 | Not Available | Positive | 3024347 - 3024712 | 14281.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





