Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cyanate transporter | SAMEA3472056_02978 | Not Available | Positive | 2993921 - 2995102 | 42478.5 |
| galactoside o-acetyltransferase | SAMEA3472056_02979 | Not Available | Negative | 2995205 - 2995825 | 23108.8 |
| lactose permease | SAMEA3472056_02980 | Not Available | Negative | 2995882 - 2997135 | 46505.9 |
| beta-d-galactosidase | SAMEA3472056_02981 | Not Available | Negative | 2997187 - 3000261 | 116476.0 |
| lactose operon repressor | SAMEA3472056_02982 | Not Available | Negative | 3000384 - 3001475 | 38888.9 |
| arac-family transcriptional regulator | SAMEA3472056_02983 | Not Available | Negative | 3001503 - 3002456 | 35662.0 |
| beta-lactamase fold protein | SAMEA3472056_02984 | Not Available | Negative | 3002476 - 3003252 | 28603.1 |
| dna-binding transcriptional activator mhpr | SAMEA3472056_02985 | Not Available | Negative | 3003367 - 3004314 | 35538.3 |
| 3-(3-hydroxyphenyl)propionate hydroxylase | SAMEA3472056_02986 | Not Available | Positive | 3004391 - 3006055 | 62170.3 |
| 2,3-dihydroxyphenylpropionate/2, 3-dihydroxicinnamic acid 1,2- dioxygenase | SAMEA3472056_02987 | Not Available | Positive | 3006057 - 3007001 | 34198.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





