Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| asch domain protein | SAMEA3472056_02958 | Not Available | Positive | 2971575 - 2971985 | 15135.1 |
| periplasmic binding protein, substrate ribose (sugar-binding protein), abc-type transport system | SAMEA3472056_02959 | Not Available | Positive | 2972236 - 2973222 | 35671.3 |
| atp-binding component of abc sugar transport system | SAMEA3472056_02960 | Not Available | Positive | 2973271 - 2974755 | 54409.1 |
| sugar abc transporter permease | SAMEA3472056_02961 | Not Available | Positive | 2974748 - 2975719 | 34929.8 |
| permease component of sugar abc transport system | SAMEA3472056_02962 | Not Available | Positive | 2975716 - 2976672 | 33769.8 |
| putative zinc-binding dehydrogenase | SAMEA3472056_02963 | Not Available | Positive | 2976759 - 2977808 | 37979.6 |
| protein | SAMEA3472056_02964 | Not Available | Positive | 2978051 - 2978866 | 31805.5 |
| Trna-pseudo | Not Available | Not Available | Positive | 2979209 - 2979289 | Not Available |
| lyse family translocator | SAMEA3472056_02966 | Not Available | Negative | 2979541 - 2980173 | 23208.7 |
| protein | SAMEA3472056_02967 | Not Available | Positive | 2980359 - 2980634 | 9929.94 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





