Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative signal transduction protein | SAMEA3472056_02948 | Not Available | Positive | 2961139 - 2962227 | 40741.3 |
| lysr family transcriptional regulator | SAMEA3472056_02949 | Not Available | Negative | 2962269 - 2963201 | 34760.8 |
| inner membrane protein | SAMEA3472056_02950 | Not Available | Negative | 2963293 - 2963790 | 17312.1 |
| ankyrin | SAMEA3472056_02951 | Not Available | Positive | 2964048 - 2964653 | 21630.3 |
| protein | SAMEA3472056_02952 | Not Available | Positive | 2964693 - 2965556 | 32149.5 |
| yahf/fdra-like protein | SAMEA3472056_02953 | Not Available | Positive | 2965546 - 2967093 | 55462.9 |
| putative cytoplasmic protein | SAMEA3472056_02954 | Not Available | Positive | 2967093 - 2968511 | 50345.0 |
| protein | SAMEA3472056_02955 | Not Available | Positive | 2968537 - 2968902 | 12518.5 |
| carbamate kinase-like protein | SAMEA3472056_02956 | Not Available | Positive | 2968934 - 2969884 | 34001.9 |
| deaminase | SAMEA3472056_02957 | Not Available | Positive | 2969894 - 2971276 | 50652.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





