Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adhesin | SAMEA3472056_02938 | Not Available | Negative | 2948328 - 2950625 | 79571.7 |
| uncharacterised protein | SAMEA3472056_02939 | Not Available | Negative | 2950667 - 2951428 | 28317.6 |
| uncharacterised protein | SAMEA3472056_02940 | Not Available | Negative | 2951445 - 2951585 | 5331.64 |
| hth dna-binding domain-containing protein | SAMEA3472056_02941 | Not Available | Negative | 2951582 - 2952376 | 29518.2 |
| type 1 fimbriae regulatory protein fimb | SAMEA3472056_02942 | Not Available | Negative | 2952706 - 2953269 | 21831.7 |
| uncharacterised protein | SAMEA3472056_02943 | Not Available | Positive | 2954073 - 2954324 | 9029.93 |
| choline dehydrogenase | SAMEA3472056_02944 | Not Available | Negative | 2954326 - 2956014 | 62603.0 |
| betaine aldehyde dehydrogenase | SAMEA3472056_02945 | Not Available | Negative | 2956028 - 2957500 | 52892.2 |
| transcriptional regulator beti | SAMEA3472056_02946 | Not Available | Negative | 2957514 - 2958101 | 21800.4 |
| high-affinity choline transport protein (bcct-family transporter) | SAMEA3472056_02947 | Not Available | Positive | 2958230 - 2960263 | 75846.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





