Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l36 | SAMEA3472056_02918 | Not Available | Negative | 2925706 - 2925846 | 5466.94 |
| 50s ribosomal protein l31 | SAMEA3472056_02919 | Not Available | Negative | 2925846 - 2926112 | 10051.9 |
| small predicted membrane protein | SAMEA3472056_02920 | Not Available | Negative | 2926462 - 2926563 | 3999.01 |
| putative nadh:flavin oxidoreductase | SAMEA3472056_02921 | Not Available | Negative | 2927037 - 2928179 | 41800.1 |
| putative hydrolase | SAMEA3472056_02922 | Not Available | Negative | 2928423 - 2929343 | 33207.5 |
| putative lysr-like transcriptional regulator | SAMEA3472056_02923 | Not Available | Positive | 2929500 - 2930426 | 34360.5 |
| putative transcriptional regulator, lysr family | SAMEA3472056_02924 | Not Available | Positive | 2930627 - 2931520 | 33243.1 |
| putative aldo/keto reductase | SAMEA3472056_02925 | Not Available | Negative | 2931551 - 2932540 | 36239.4 |
| putative aldo/keto reductase | SAMEA3472056_02926 | Not Available | Negative | 2932567 - 2933418 | 31822.1 |
| ig domain-containing protein | SAMEA3472056_02927 | Not Available | Positive | 2933984 - 2938240 | 149863.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





