Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa dehydrogenase | SAMEA3472056_02821 | Not Available | Negative | 2836994 - 2839438 | 89201.7 |
| phosphoheptose isomerase | SAMEA3472056_02822 | Not Available | Positive | 2839678 - 2840256 | 20816.0 |
| amidotransferase | SAMEA3472056_02823 | Not Available | Positive | 2840462 - 2841229 | 28580.1 |
| membrane protein | SAMEA3472056_02824 | Not Available | Negative | 2841200 - 2841940 | 28022.8 |
| toxin of the yafq-dinj toxin-antitoxin system | SAMEA3472056_02825 | Not Available | Negative | 2842096 - 2842374 | 10831.2 |
| antitoxin of yafq-dinj toxin-antitoxin system | SAMEA3472056_02826 | Not Available | Negative | 2842377 - 2842637 | 9392.3 |
| nlpc/p60 family protein | SAMEA3472056_02827 | Not Available | Positive | 2842970 - 2843596 | 24493.1 |
| rayt rep element-mobilizing transposase | SAMEA3472056_02828 | Not Available | Positive | 2843873 - 2844370 | 20009.9 |
| flagellar system protein | SAMEA3472056_02829 | Not Available | Negative | 2844586 - 2846325 | 63291.3 |
| lateral flagellar motor protein b (motb-like) | SAMEA3472056_02830 | Not Available | Positive | 2846420 - 2847055 | 23764.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





