Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative signaling protein | SAMEA3472056_02762 | Not Available | Negative | 2793580 - 2794812 | 46555.9 |
| zinc transport protein | SAMEA3472056_02763 | Not Available | Positive | 2795067 - 2796050 | 36614.3 |
| uncharacterised protein | SAMEA3472056_02765 | Not Available | Positive | 2796325 - 2796495 | 6324.73 |
| atp-independent rna helicase | SAMEA3472056_02766 | Not Available | Positive | 2796528 - 2797901 | 49218.7 |
| c32 trna thiolase | SAMEA3472056_02767 | Not Available | Negative | 2798030 - 2798965 | 35498.9 |
| uncharacterised protein | SAMEA3472056_02816 | Not Available | Positive | 2833302 - 2833637 | 12479.0 |
| putative beta-lactamase hcpc precursor | SAMEA3472056_02817 | Not Available | Positive | 2833875 - 2834825 | 35381.9 |
| transposase is4 family protein | SAMEA3472056_02818 | Not Available | Positive | 2835129 - 2835656 | 19632.2 |
| putative carbon-nitrogen hydrolase | SAMEA3472056_02819 | Not Available | Negative | 2835557 - 2836324 | 28812.3 |
| inhibitor of vertebrate lysozyme precursor | SAMEA3472056_02820 | Not Available | Positive | 2836478 - 2836951 | 16873.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





