Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative atp-binding protein | SAMEA3472056_02646 | Not Available | Positive | 2716869 - 2718266 | 52629.5 |
| putative inner membrane protein | SAMEA3472056_02647 | Not Available | Positive | 2718263 - 2719324 | 39408.5 |
| dna-binding transcriptional regulator tyrr | SAMEA3472056_02648 | Not Available | Positive | 2719472 - 2721013 | 57689.6 |
| thiol peroxidase | SAMEA3472056_02649 | Not Available | Negative | 2721057 - 2721563 | 17836.3 |
| putative mandelate racemase/muconate lactonizing family protein | SAMEA3472056_02650 | Not Available | Positive | 2721682 - 2722647 | 34689.0 |
| putative carboxypeptidase | SAMEA3472056_02651 | Not Available | Negative | 2722622 - 2723350 | 26559.4 |
| putative nad(p) binding enzyme | SAMEA3472056_02652 | Not Available | Negative | 2723641 - 2724291 | 23833.9 |
| hydrolase | SAMEA3472056_02653 | Not Available | Negative | 2724297 - 2725229 | 34074.4 |
| hydrolase | SAMEA3472056_02654 | Not Available | Negative | 2725229 - 2726149 | 33594.2 |
| lysr family transcriptional regulator | SAMEA3472056_02655 | Not Available | Positive | 2726287 - 2727186 | 33477.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





