Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| binding-protein-dependent transport system inner membrane protein | SAMEA3472056_02636 | Not Available | Positive | 2706034 - 2706915 | 33227.3 |
| binding-protein-dependent transport system inner membrane protein | SAMEA3472056_02637 | Not Available | Positive | 2706902 - 2707744 | 31268.2 |
| zinc-type alcohol dehydrogenase-like protein ycjq | SAMEA3472056_02638 | Not Available | Positive | 2707775 - 2708827 | 38234.6 |
| transient receptor potential locus | SAMEA3472056_02639 | Not Available | Positive | 2708845 - 2709633 | 29788.6 |
| oxidoreductase, nadh-binding | SAMEA3472056_02640 | Not Available | Positive | 2709643 - 2710698 | 38687.3 |
| glycosyl hydrolase | SAMEA3472056_02641 | Not Available | Positive | 2710695 - 2712962 | 84935.1 |
| beta-phosphoglucomutase | SAMEA3472056_02642 | Not Available | Positive | 2712959 - 2713618 | 23562.3 |
| sugar transporter subunit: atp-binding component of abc superfamily transporter | SAMEA3472056_02643 | Not Available | Positive | 2713632 - 2714714 | 40132.0 |
| outer membrane protein g | SAMEA3472056_02644 | Not Available | Positive | 2714759 - 2715664 | 34858.9 |
| transcriptional regulator ycjw | SAMEA3472056_02645 | Not Available | Negative | 2715715 - 2716713 | 36146.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





